Pavel Tomancak
Pavel Tomancak heads a research group at the Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG) in Dresden, UK

Pavel Tomancak heads a research group at the Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG) in Dresden, where he has worked since 2005. After obtaining his PhD at the EMBL in Heidelberg in 1999, he was a post-doc at the University of California in the lab of Gerald M. Rubin. There, he worked on genome-scale imaging to elucidate the genetic basis of Drosophila melanogaster development. At MPI-CPG, his group focuses on comparative modelling of the development of Drosophila and other flies to infer fundamental rules about the genetic control of animal development and its evolution.
He is a great proponent of open-access microscopy technology, and has been closely involved with developing the OpenSPIM project for do-it-yourself light-sheet microscopy, and with the open-source image processing software Fiji. In 2016 he was elected an EMBO member.
Selected publications
  • Globally optimal stitching of tiled 3D microscopic image acquisitions.
    S Preibisch, S Saalfeld, P Tomancak
    Bioinformatics 25 (11), 1463-1465 (2009)
  • Fiji: an open-source platform for biological-image analysis.
    Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid, Jean-Yves Tinevez, Daniel James White, Volker Hartenstein, Kevin Eliceiri, Pavel Tomancak & Albert Cardona
    Nature Methods volume 9, pages 676–682 (2012)
  • Systematic imaging reveals features and changing localization of mRNAs in Drosophila development.
    Helena Jambor, Vineeth Surendranath, Alex T. Kalinka, Pavel Mejstrik, Stephan Saalfeld, Pavel Tomancak
    Elife, 4 Art. No. e05003 (2015)
  • Epithelial rotation is preceded by planar symmetry breaking of actomyosin and protects epithelial tissue from cell deformations.
    Ivana Viktorinová, Ian Henry, Pavel Tomancak
    PLoS Genet, 13(11) Art. No. 1007107 (2017)
  • Attachment of the blastoderm to the vitelline envelope affects gastrulation of insects.
    Stefan Münster, Akanksha Jain, Alexander Mietke, Anastasios Pavlopoulos, Stephan W. Grill, Pavel Tomancak
    Nature, 568(7752) 395-399 (2019)